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Before and after Scrubber de-identification
Scrubber 2.8 was used to scrub the examples below.
Scrubber 3.0 has significantly better performance (Accepted: BMC Medical Decision Making).
1. XML formatted input
- Before: testcase.xml
- After: scrubbed_testcase.xml
2. Unstructured text input
- Before: testcase.txt
- After: scrubbed_testcase.txt
Before and after cTAKES annotations
Automated concept retrieval : Medical vocabularies and data dictionary
Scrubber 3.X is being donated and ported to the Apache cTAKES project.
We are concentrating our efforts on this transition.