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https://open.med.harvard.edu/svn/eagle-i-dev/apps/trunk/dev-resources/eagle-i-etl-dist-1.7MS2.01.zip
Download this SWIFT toolkit distribution, unzip it into a dedicated directory, and navigate to it, for example
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mkdir ~/eagle-i unzip -d ~/eagle-i eagle-i-etl-dist-1.7MS2.01.zip cd eagle-i/eagle-i-etl-dist-1.7M2.01 |
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To generate etl templates and maps, run the script:
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./generate-inputs.sh --type INSTRUMENT|SERVICE|PERSON|ORGANIZATION|typeURI |
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Transformation maps will be contained in a subdirectory of ./maps named after the type and ontology version, e.g:
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./maps/instrument_ont_v1.1.0 |
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To run an ETL, execute the script:
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./etl.sh --dir dataDirectory --workflow DRAFT|CURATION|PUBLISH username:password repositoryURL |
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