Our subversion repository can be browsed here:
https://open.med.harvard.edu/svn/eagle-i-dev
The two relevant directories are:
- apps: the code for the different software components and the artifacts to compile them.
- datamodel: the ontology files (owl) and artifacts for packaging them into a jar. Note that the pure ontology portion is mirrored at http://code.google.com/p/eagle-i/
apps
- trunk - contains the active development of the different software components.
- branches - contains the releases of the software.
Directory | Description |
---|---|
| Miscellaneous Java services and utilities used by search and data tools applications. Includes: Solr index, auto-suggest, authentication and connection, logging, Jira connector for feedback,... | |
common/ui | Front-end GWT code shared by search and data tools applications (SWEET and data management); |
datatools | Shared back-end code for read/write operations on an eagle-i repository; |
dev-resources | Resources for developers, such as eclipse configuration files. |
documentation | Documentation, including online user help (note: does not yet contain admin and developers guides found in this website). |
examples | Sample code and configuration files. |
model | Abstraction for interacting with an eagle-i annotated ontology, optimized for access from client code (API and Jena-based implementation). |
nlp | Experiments with LingPipe for extracting eagle-i top-level resources from PubMed abstracts. |
reference-implementations | Code that is no longer active in the main codebase but is helpful as reference. |
repository | Repository code and administrative tools. This directory is pretty much self-contained (except for its dependency on common/ui/static-resources). |
search | Search application back-end. |
webapp | User-facing web applications and web services except for repository. The modules in this directory produce .war files. |
datamodel
- trunk - contains the active development of the ontology.
- releases - contains the releases of the ontology.
Directory | Description |
---|---|
| The owl files that conform the eagle-i resource ontology, including imports. This directory also contains the main application ontology (eagle-i-app.owl) |
tools | The maven files to build the ontology jar and miscellaneous application-level administrative ontologies. |