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| Warning |
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The ETLer expects data to be entered into one of the generated templates, and a few conventions to be respected (outside the scope of this guide) . A data curator usually makes sure that the template is correctly filled. In particular, the location of the resources to be ETLd (e.g. Lab or Core facility name) must be provided in every row of data and must correspond to a location already entered in the eagle-i repository via SWEET. |
- Place your input files (i.e. the completed templates) in a directory of your choice, e.g.
dataDirectory. All files contained in this directory will be processed by the ETLer. - To run an ETL, execute the script:
AllNo Format ./etl.sh --dir dataDirectory --workflow DRAFT|CURATION|PUBLISH username:password repositoryURL
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- the
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- data
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- will be
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- uploaded to the requested workflow state.
- To verify the data upload, log on to the SWEET application and select the lab to which the ETLd resources belong.
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