 Marc-Danie Nazaire | 96730094b59 | Merge from develop | | |
Marc-Danie Nazaire | 4fa178bfe62 | Merge pull request #1068 in SHRINE/shrine from feature/SHRINE2020-504 to develop
* commit 'daa13e8732904972dbeba94a0... | | |
Marc-Danie Nazaire | 9274ef867cb | Merge from develop | | |
Marc-Danie Nazaire | 2a6d2564646 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into bugfix/SHRINE2020-599 | | |
Marc-Danie Nazaire | 2a25d783f97 | Merge pull request #1059 in SHRINE/shrine from feature/SHRINE2020-501 to develop
* commit 'debf682fff36801211d07ad67... | | |
Marc-Danie Nazaire | debf682fff3 | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb - rename... | | |
Marc-Danie Nazaire | d1a07187830 | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb - update... | | |
Marc-Danie Nazaire | a2c928eb23b | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb - update... | | |
Marc-Danie Nazaire | c03911d80f2 | Merge branch 'feature/SHRINE2020-501' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into bugfix/SHRINE... | | |
Marc-Danie Nazaire | 9cb04bfca78 | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb - Added ... | | |
 dwalend | 520894c8814 | Assigned log levels to all raw problems for SHRINE2020-515, and fixed SHRINE2020-544 in the process | | |
dwalend | 0409c858571 | Addded ability to log problems at a problem-defined level for SHRINE2020-515 | | |
Marc-Danie Nazaire | 3cdd0c93633 | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb - Remove... | | |
Marc-Danie Nazaire | 78d079de150 | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb - Fixed ... | | |
Marc-Danie Nazaire | da129053c65 | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb - Fixed ... | | |
dwalend | fcbac621874 | Cleanup for SHRINE2020-570 | | |
dwalend | 5395d58e52d | Got the network, local node, and message queue cached for SHRINE2020-570 | | |
 elizah | 2cb52f43d69 | use reset text | | |
 bcarmen | daa13e87329 | saving work | | |
bcarmen | f4c082a714e | saving updated snapshot test | | |
bcarmen | 3959607d4ab | added s onto demographic distributions | | |
bcarmen | 0536fe470bc | Merge branch 'develop' into feature/SHRINE2020-518 | | |
elizah | 243a5d795e9 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-580 | | |
elizah | a967a5b7633 | inline alert | | |
bcarmen | c465f0f02ea | saving work | | |
bcarmen | bc7249c92bf | saving work | | |
bcarmen | 104a4eeb898 | removed unused file | | |
bcarmen | 87ba63f62c5 | made recommended changes from BA review | | |
bcarmen | 8c4ec2a8880 | Merge branch 'develop' into feature/SHRINE2020-506 | | |
elizah | 1f85e872525 | rename alert box | | |
 Eliza Huang | 7855f08370a | Merge pull request #1057 in SHRINE/shrine from feature/SHRINE2020-526 to develop
* commit 'e7c787763f8abc299e8dc1c6d... | | |
elizah | e7c787763f8 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-526 | | |
 Ben Carmen | a895b9d8f78 | Merge pull request #1055 in SHRINE/shrine from bugfix/SHRINE2020-578 to develop
* commit 'bc897bb79f0e7c7d83354d3667... | | |
 Bill Simons | 9904cd0e9d2 | Remove unnecessary drops and data migrations... not needed for a fresh install | | |
Marc-Danie Nazaire | 70c594f1f30 | SHRINE2020-507 - Display a link to download the site specific csv file - Removed content disposition header in response | | |
Bill Simons | 2cb6ad1d00c | Remove create database statements from mssql scripts | | |
Marc-Danie Nazaire | f1bbd1acdd4 | Added rename of I2B2ResultEnvelope | | |
Marc-Danie Nazaire | cdc6410d739 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-501
# Co... | | |
bcarmen | bc897bb79f0 | saving work | | |
bcarmen | 85e4de18f68 | saving work | | |
elizah | edfc87769f5 | offset y | | |
elizah | dfe8600c283 | fix text | | |
bcarmen | c582573661c | Merge branch 'develop' into bugfix/SHRINE2020-578 | | |
elizah | 446c87e0a53 | merge from develop | | |
Marc-Danie Nazaire | 7d24dd99f0c | Merge pull request #1051 in SHRINE/shrine from feature/SHRINE2020-499 to develop
* commit '08bd2fecbf42eace5b68e2ccb... | | |
Marc-Danie Nazaire | 08bd2fecbf4 | SHRINE2020-499 - Migrate the BREAKDOWN_RESULT table to Slick - Renamed I2b2ResultEnvelope to I2b2Result | | |
Marc-Danie Nazaire | db6f32a369e | SHRINE2020-599 - Modify Aim3Service to use QueryHistoryDB - More code cleanup | | |
Marc-Danie Nazaire | 91b9f1b3ce9 | SHRINE2020-599 - Modify Aim3Service to use QueryHistoryDB - More code cleanup | | |
bcarmen | c2bd4c7f634 | saving work | | |
Marc-Danie Nazaire | 113b04cb334 | SHRINE2020-599 - Modify Aim3Service to use QueryHistoryDB - Code cleanup | | |
Marc-Danie Nazaire | 3aa28a4ca02 | SHRINE2020-599 - Modify Aim3Service to use QueryHistoryDB - Code cleanup | | |
Marc-Danie Nazaire | 234894e3737 | SHRINE2020-599 - Modify Aim3Service to use QueryHistoryDB - Fixed testReadI2b2AdminQueryingUsers test | | |
dwalend | 95077bdbe3d | Code cleanup, planning for SHRINE2020-570, and renamed webClientTimeOut to receiveWaitTime | | |
Marc-Danie Nazaire | cfa2153a880 | SHRINE2020-599 - Modify Aim3Service to use QueryHistoryDB - modified to use distinctOn | | |
 David Walend | 9cd823958c5 | Merge pull request #1058 in SHRINE/shrine from feature/SHRINE2020-569 to develop
* commit '5e6071ab6b740e7adecb1ae6c... | | |
bcarmen | 159293b4f40 | saving work | | |
bcarmen | ffb0bd9aa54 | Merge branch 'feature/SHRINE2020-591' into feature/SHRINE2020-506 | | |
Marc-Danie Nazaire | ecb47228343 | SHRINE2020-599 - Modify Aim3Service to use QueryHistoryDB | | |
David Walend | 68294d0fb76 | Merge pull request #1062 in SHRINE/shrine from feature/SHRINE2020-612 to feature/SHRINE2020-506
* commit 'bb8d3f3dd6... | | |
dwalend | bb8d3f3dd63 | Sorting for SHRINE2020-612 | | |
elizah | 47fe067292b | fix test | | |
elizah | 0b9a4d4d039 | rm config | | |
elizah | c6fa406be52 | fix tests | | |
elizah | 3c93a36574e | remove logger config | | |
elizah | f995305dd75 | consolidate to api log | | |
elizah | 95dbc60bbfe | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-516 | | |
elizah | 58070a89603 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-508 | | |
elizah | 7b8c7ee23e4 | config in xml | | |
dwalend | 5e6071ab6b7 | Merge from develop | | |
Bill Simons | da10781935c | Use an index name less than 30 chars to get the script to work on Oracle versions < 12.2 | | |
Bill Simons | f09818ef8d9 | Change comment to `/*` style because `--` style was failing in sqlplus; remove incorrect `/` buffer execution charact... | | |
Bill Simons | e1b720aa5c8 | get oracle base scripts in working order for auto-deployment; remove hub scripts for oracle and mssql as we will curr... | | |
dwalend | 988e167ff0c | -1 signals 10 or fewer, and must be filtered out for SHRINE2020-612 | | |
dwalend | 47e4e86ee2b | Stray todo in SHRINE2020-612 | | |
dwalend | 8a8b139bd81 | Removed the bits that keep breakdowns from showing in the new UI for SHRINE2020-612 | | |
dwalend | f306a4c06ba | Now supplying the breakdowns for SHRINE2020-612 | | |
dwalend | 065de7bbbda | Some code cleanup for SHRINE2020-612 | | |
elizah | c23284f301a | cleanup | | |
elizah | 04f6f4813fd | fix condition | | |
elizah | 636ff3315e5 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-580 | | |
elizah | ee02c4550b1 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-526 | | |
elizah | 5f85733f9f3 | handle tooltip close | | |
dwalend | ff7f43a7220 | Merge remote-tracking branch 'origin/develop' into feature/SHRINE2020-612 | | |
dwalend | 070cb583a96 | Pass one of breakdowns - getting the request in for SHRINE2020-612 | | |
David Walend | 7c1f92a0f65 | Merge pull request #1061 in SHRINE/shrine from bugfix/SHRINE2020-597-revive-act-audit-metrics-prototype to develop
*... | | |
dwalend | 2d87b209d64 | Stray println for SHRINE2020-597 | | |
Marc-Danie Nazaire | 15f573655a8 | SHRINE2020-507 - Added stub api call for creating the demographic - fixed imports | | |
Marc-Danie Nazaire | 6275cc2b5f5 | Merge branch 'feature/SHRINE2020-507' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRIN... | | |
Marc-Danie Nazaire | 33fb6f81569 | SHRINE2020-507 - Added stub api call for creating the demographic | | |
dwalend | c316fb711f9 | Merging | | |
Marc-Danie Nazaire | eeac96fd884 | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb - Remove... | | |
Marc-Danie Nazaire | fa0f4ad4c2d | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb - Remove... | | |
dwalend | 514ce01d7f6 | Merge remote-tracking branch 'origin/develop' into feature/SHRINE2020-569 | | |
dwalend | 44fbb0d50cb | Fixed logging, but theres mroe to do for SHRINE2020-597 | | |
David Walend | eb012854321 | Merge pull request #1056 in SHRINE/shrine from bugfix/SHRINE2020-594 to develop
* commit '72e7624a334d9a5c457422ffa8... | | |
Marc-Danie Nazaire | 906bfca51be | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb - Fixed ... | | |
elizah | 1e5fb584ca9 | display alert | | |
Marc-Danie Nazaire | 6287f4fe492 | Merge branches 'develop' and 'feature/SHRINE2020-499' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine in... | | |
Marc-Danie Nazaire | b004a565fb3 | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb - remove... | | |
Marc-Danie Nazaire | ff7740e8a7f | Merge branch 'feature/SHRINE2020-499' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRIN... | | |
Marc-Danie Nazaire | d16f8937a9a | SHRINE2020-501 - Replace calls to functions in SquerylAdapterDao to corresponding function in QueryHistoryDb | | |
dwalend | c2f87ef60e6 | cleared a todo for SHRINE2020-569 | | |
dwalend | b2189a20bbe | Ran a test and things look better - tests are pretty uneven - for SHRINE2020-369 | | |
bcarmen | 41ffaca788d | saving work | | |
bcarmen | f7be663d616 | fixed package-lock.json | | |
elizah | 95d289fb461 | show tooltip | | |
elizah | e8c22565cd5 | add copied tooltip | | |
dwalend | fd5adec0ce0 | Now running vs scale-up for SHRINE2020-569 | | |
bcarmen | c58e94258b8 | fixed failing unit test | | |
bcarmen | 12359cc9723 | saving work | | |
dwalend | 9ea1f10b374 | Now getting some good performance numbers for SHRINE2020-569 | | |
dwalend | d79623a0693 | timer delay. three of four stats calculated correctly. Will fix time per query next. | | |
dwalend | 142d8554241 | Closer to driving a real load for SHRINE2020-569 | | |
bcarmen | e32162af6b8 | saving work | | |
dwalend | d0ad4ffba03 | Measuring the time for SHRINE2020-569 | | |
dwalend | 9aa8f5144ca | Merging fix from SHRINE2020-594 | | |
dwalend | 72e7624a334 | Switched the logic for setting up queues for a netowrk to work with Queues instead of MomQueueNames to fix SHRINE2020... | | |
dwalend | 4ed686239a6 | Got a query working in a script for SHRINE2020-569 | | |
bcarmen | 677a94f637c | saving work | | |
bcarmen | d3cfe0536cf | Merge branch 'develop' into feature/SHRINE2020-518 | | |
elizah | bf0b55c4243 | fix snap | | |
bcarmen | 2fd5b49c099 | saving work | | |
David Walend | 19c6762d3a2 | Merge pull request #1053 in SHRINE/shrine from feature/SHRINE2020-539 to develop
* commit 'da88120d50877d302637a3a67... | | |
David Walend | ca0ca5e6ead | Merge pull request #1054 in SHRINE/shrine from bugfix/SHRINE2020-293 to develop
* commit '7dad25a795e5db365241acd75e... | | |
dwalend | 52a28a037dd | Revived the hub client command line test befor digging into a load driver for SHRINE2020-569 | | |
dwalend | da88120d508 | Marc-Danie spotted a typo in SHRINE2020-539 | | |
bcarmen | 4860158198c | added snapshot change | | |
bcarmen | 470f37f115a | Merge branch 'develop' into feature/SHRINE2020-518 | | |
elizah | acc68208a15 | using div not card | | |
dwalend | 772ecf58465 | Moved all dispatchers (hub and downstream) to use parallel dispatch after opening the envelope for SHRINE2020-569 | | |
bcarmen | fe4fff48361 | possible fix of drag and drop highlight issues | | |
elizah | 45b867f1d6e | Merge branch 'feature/SHRINE2020-508' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRIN... | | |
elizah | 94dd60bb535 | config logLevel in xml | | |
dwalend | 7dad25a795e | Fixed cut-paste error for SHRINE2020-293 | | |
bcarmen | a6cdc25878e | Merge branch 'develop' into bugfix/SHRINE2020-578 | | |
elizah | c4cf332a0b2 | default log lvl to info | | |
elizah | be691d2cf86 | using dev node | | |
elizah | b46a94e3648 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-519 | | |
bcarmen | bb8763f7349 | Merge branch 'develop' into bugfix/SHRINE2020-369 | | |
bcarmen | ba0333efe55 | fix of error when start query fails | | |
dwalend | 74c192b22ac | Review feedback from Bill for SHRINE2020-539 | | |
elizah | c448fea9f40 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-507 | | |
Marc-Danie Nazaire | 742f07f46b2 | Added back missing implicit to val resultOutputType | | |
elizah | 5f64f570513 | fix snap test | | |
elizah | b6d8e5a1cf1 | merge db changes | | |
Marc-Danie Nazaire | f6f948f5f22 | SHRINE2020-499 - Migrate the BREAKDOWN_RESULT table to Slick - Fixed merge issue | | |
Marc-Danie Nazaire | fb17c3b7a02 | Merge branch 'feature/SHRINE2020-495' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRIN... | | |
Marc-Danie Nazaire | a8fe8d8336c | Merge pull request #1021 in SHRINE/shrine from feature/SHRINE2020-495 to develop
* commit 'c2d1afef3f343b6f453f82a9f... | | |
Marc-Danie Nazaire | c2d1afef3f3 | SHRINE2020-495 - Migrate the COUNT_RESULT and ERROR_RESULT table to Slick - code cleanup | | |
David Walend | 784f030761c | Merge pull request #1045 in SHRINE/shrine from feature/SHRINE2020-539 to develop
* commit '561be3e9249122bbae939799e... | | |
Ben Carmen | ecb8a5da79b | Merge pull request #1047 in SHRINE/shrine from bugfix/SHRINE2020-421 to develop
* commit 'f1ce2f7867d7d2057571398b9f... | | |
bcarmen | f1ce2f7867d | saving work | | |
elizah | da6eff2a9e8 | remove . | | |
Ben Carmen | b1d35e25e5a | Merge pull request #1042 in SHRINE/shrine from bugfix/SHRINE2020-572 to develop
* commit '4ae3b3e793e0b04b9d6c270cb3... | | |
bcarmen | 4ae3b3e793e | Merge branch 'develop' into bugfix/SHRINE2020-572 | | |
bcarmen | b4aef71f132 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into develop | | |
bcarmen | f6c6bd1fb8c | Merge branch 'develop' into feature/SHRINE2020-573 | | |
Ben Carmen | 3825b7413d4 | Merge pull request #1048 in SHRINE/shrine from bugfix/SHRINE2020-576 to develop
* commit 'e697e5f9461ae777350f4efec0... | | |
elizah | 225e3ee5327 | update snap | | |
elizah | 7e3554379e8 | change icon and phrase | | |
bcarmen | 2aedb383507 | saving work | | |
elizah | dd1dd8cd28e | change hyper link location | | |
elizah | d23bc705417 | add download icon | | |
elizah | 05731b45d2a | merge develop into branch | | |
elizah | 8bc52aa2121 | fix select queued query | | |
Marc-Danie Nazaire | 101d45ee1b6 | SHRINE2020-500 - Migrate remaining functions in SquerylAdapterDao to Slick - added storeBreakdownFailures | | |
Eliza Huang | 031ea859a65 | Merge pull request #987 in SHRINE/shrine from bugfix/SHRINE2020-399 to develop
* commit '6a2d3b57d1b73d0ec418dc82d98... | | |
elizah | 6a2d3b57d1b | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into bugfix/SHRINE2020-399 | | |
David Walend | c55f703d347 | Merge pull request #1049 in SHRINE/shrine from feature/SHRINE2020-514 to develop
* commit 'ce595d80b26da0fefe1c5b807... | | |
Marc-Danie Nazaire | 6bc5e4c9963 | SHRINE2020-500 - Migrate remaining functions in SquerylAdapterDao to Slick - fixed typo in imports | | |
Marc-Danie Nazaire | 60b07d8d001 | Merge branch 'feature/SHRINE2020-499' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRIN... | | |
Marc-Danie Nazaire | 6941a42ea52 | SHRINE2020-499 - Migrate the BREAKDOWN_RESULT table to Slick - Fixed unit test | | |
Marc-Danie Nazaire | 1fe3478f1da | Merge branch 'feature/SHRINE2020-495' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRIN... | | |
elizah | 2847ccc28d5 | shutdown | | |
elizah | 31a36f9f6bc | log startup on info | | |
elizah | b517523d8e6 | using QueryId in ShrineQuery | | |
elizah | 968b23c20d3 | use QueryId not long | | |
dwalend | ce595d80b26 | Changed the existing debug log statement to error for SHRINE2020-514 | | |
bcarmen | e697e5f9461 | fix for moving lab terms between groups | | |
 Bamboo User | fd07f5b19b2 | Merge release branch release/3.0.1 into master. | | |
Bamboo User | 248c8d99104 | Update POMs with release version 3.0.1. | | |
Marc-Danie Nazaire | 1e18857ca5e | SHRINE2020-495 - Migrate the COUNT_RESULT and ERROR_RESULT table to Slick - added storeErrorResults function | | |
Marc-Danie Nazaire | c7d1fde2f43 | SHRINE2020-495 - Migrate the COUNT_RESULT and ERROR_RESULT table to Slick - added storeCountResults function | | |
dwalend | 9ef0741efa5 | Thread pool didn't make a difference because we hit the AWS throughput limit | | |
elizah | 62d87eb324c | fix query header | | |
elizah | 4f92f93c3e0 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-516 | | |
elizah | 54ebf0c8186 | Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-519 | | |
Marc-Danie Nazaire | 44919c156c2 | SHRINE2020-500 - Migrate remaining functions in SquerylAdapterDao to Slick - added botCheck | | |
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