SHRINE
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shrine

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  1. SHRINE
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AuthorCommitMessageCommit dateBuilds
XavXav
2d0c61bd66fattempt to SSO sign out from the top-right badge
Marc-Danie NazaireMarc-Danie Nazaire
99c98e02976SHRINE2020-1087 -Allow the user to define the relationship between the 2nd and 3rd event
dwalenddwalend
7a3db567734Merging
dwalenddwalend
8fbe04711dbMarc-Danie review comments for SHRINE2020-1181
dwalenddwalend
012861400d1Merge remote-tracking branch 'origin/develop' into feature/SHRINE2020-1181
dwalenddwalend
75f35cdbcbfFinally untangled and deleted enough to move BroadcastMessage for SHRINE2020-1102
dwalenddwalend
daabf5f2317Oh that
dwalenddwalend
b86c3508bc6Finally moving some code instead of just deleting it for SHRINE2020-1102
dwalenddwalend
b909d51572bDeleted the handlers nonsense and decoupled a lot of concrete-abstract cross-reference knots for SHRINE2020-1102
Marc-Danie NazaireMarc-Danie Nazaire
79478d546e8SHRINE2020-1182 - Vericode Scan: Fix cross-site scripting flaw in qep/.../Header/HeaderMenu.js
Marc-Danie NazaireMarc-Danie Nazaire
fd0543f2df1Merge pull request #1303 in SHRINE/shrine from feature/SHRINE2020-1182 to develop * commit '92b7e4a0ed37d9cbcf2a1210...
Marc-Danie NazaireMarc-Danie Nazaire
a3d35fa746eChanged revision in base POM to 3.2.2
Marc-Danie NazaireMarc-Danie Nazaire
2dbfa74a00bRevert "Update POMs with release version 3.2.1." This reverts commit 027a1673fcca6c629bc5bfa9f52c56016504ba10.
Marc-Danie NazaireMarc-Danie Nazaire
92b7e4a0ed3SHRINE2020-1182 - Vericode Scan: Fix cross-site scripting flaw in qep/.../Header/HeaderMenu.js - modified to use an e...
dwalenddwalend
448a1f8d53dDeleted ReadQueryDefinitionRequest and its kin for SHRINE2020-1102
Marc-Danie NazaireMarc-Danie Nazaire
1eb5c6caa96Switched to using basic or bearer auth in login service instead of just basic auth
dwalenddwalend
d2222d8b2f8Got rid of the old rename request and response for SHRINE2020-1102
XavXav
6cb8c64f348attempt to go to the Shrine web client after successful SSO login
dwalenddwalend
dfa2df03e22Deleted ReadResultOutputTypes for SHRINE2020-1102
David WalendDavid Walend
75690fb9b4bMerge pull request #1302 in SHRINE/shrine from feature/SHRINE2020-954 to develop * commit '5b692676efa3522e5d26ca12d...
dwalenddwalend
5c2397a12caDeleted more dead code for SHRINE2020-1102
dwalenddwalend
5b692676efaRemoved the nodes web api method for SHRINE2020-954
dwalenddwalend
787606b98e8Deleting more dead code for SHRINE2020-1102
Marc-Danie NazaireMarc-Danie Nazaire
568d76d71adSHRINE2020-1182 - Vericode Scan: Fix cross-site scripting flaw in qep/.../Header/HeaderMenu.js
dwalenddwalend
b76239caaf2Deleting the really old HMS topic handling for SHRINE2020-1102
dwalenddwalend
7fa3e186d49Removed the flag/unflag commands for SHRINE2020-1102
dwalenddwalend
d24cb342841Deleted a file that wasn't used anymore for SHRINE2020-1102
dwalenddwalend
615e8d704d5Managed to move some test code for SHRINE2020-1102
dwalenddwalend
8097beaec0bSeparated the v1 protocol into its own package for SHRINE2020-1102
dwalenddwalend
5ccbcf5becdMerge branch 'feature/SHRINE2020-1181' into feature/SHRINE2020-1102
dwalenddwalend
da675396217Merge branch 'feature/SHRINE2020-954' into feature/SHRINE2020-1102
Carl WoolfCarl Woolf
02f5e722400display headers for authPing
Carl WoolfCarl Woolf
e2db30f17ecMark where/what to change in the config files -- points to wiki for explanation
Carl WoolfCarl Woolf
87389bfaf93first try for phase1 SP
dwalenddwalend
c2963fae86bCode review of SHRINE2020-954
dwalenddwalend
7550234b26fThe hub no longer needs to authorize anything SHRINE2020-954
dwalenddwalend
d4cc51d07bbRemoved support for that if-no-network business in SHRINE2020-954
dwalenddwalend
9e90e0dae33Removed the curl commands that change the network for SHRINE2020-954
dwalenddwalend
0ca2566d617Found while sweeping up SHRINE2020-1101
dwalenddwalend
d3c15ae7a7eBig delete for SHRINE2020-1101
dwalenddwalend
13d228c205aRemoved the xml definition field from queries for SHRINE2020-1101
dwalenddwalend
a155b516cecMade a JSON version of the query required for SHRINE2020-1101
dwalenddwalend
073f1045640Comment cleanup for SHRINE2020-1181
dwalenddwalend
9acbe95f0beQuick bug fix for SHRINE2020-1181
dwalenddwalend
176be5051bdRemoved first-or-any from concept groups for SHRINE2020-1181
dwalenddwalend
290a1c59a29Added first-or-any fields to timelike links for SHRINE2020-1181
dwalenddwalend
570762d6e62Oracle and MS SQL like drop column instead of just drop - for SHRINE2020-1101
dwalenddwalend
3030db96e3cRemoved xml columns from the QEP's previousQueries table for SHRINE2020-1101
Marc-Danie NazaireMarc-Danie Nazaire
f4d3f05e473SHRINE2020-1192 - Reload queries with the 3rd event when "edit criteria" is selected
Marc-Danie NazaireMarc-Danie Nazaire
188e40e6de8Merge pull request #1299 in SHRINE/shrine from feature/SHRINE2020-1088 to develop * commit 'b172dc684830dd854c827819...
David WalendDavid Walend
467cf11e186Merge pull request #1298 in SHRINE/shrine from bugfix/SHRINE2020-1106 to develop * commit '220de05eba4da1f9a33e66962...
Marc-Danie NazaireMarc-Danie Nazaire
b172dc68483SHRINE2020-1185 - Concepts in timelines from the QEP front end have lab constraints - even when they aren't labs
dwalenddwalend
220de05eba4Updated the logback library to beat an unlikely security problem for SHRINE2020-1106
Marc-Danie NazaireMarc-Danie Nazaire
1b817994c3eSHRINE2020-1088 - Validations for event 3 - labs, date ranges - Fixed constraint not set to null when value is ANY wh...
Marc-Danie NazaireMarc-Danie Nazaire
56c793534fdSHRINE2020-1088 - Validations for event 3 - labs, date ranges - Added NORMAL as a constraint type and set default bac...
Marc-Danie NazaireMarc-Danie Nazaire
31d621616d3SHRINE2020-1088 - Validations for event 3 - labs, date ranges - Modified to not include events with no concepts when ...
Marc-Danie NazaireMarc-Danie Nazaire
bf1cd9b6951Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-1088
Marc-Danie NazaireMarc-Danie Nazaire
f4d15d6d8b6Merge pull request #1292 in SHRINE/shrine from feature/SHRINE2020-1085 to develop * commit '915e4b8bb49bed45ea62ef1a...
David WalendDavid Walend
dffe5aa1119Merge pull request #1297 in SHRINE/shrine from feature/SHRINE2020-1180 to develop * commit 'c36d67b1a23e9957aef2ad50...
Marc-Danie NazaireMarc-Danie Nazaire
96291a3b7f4SHRINE2020-1088 - Validations for event 3 - labs, date ranges
dwalenddwalend
c36d67b1a23Merge remote-tracking branch 'origin/develop' into feature/SHRINE2020-1180
Marc-Danie NazaireMarc-Danie Nazaire
915e4b8bb49SHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086- Fixed check fo...
David WalendDavid Walend
aa0af85e5a8Merge pull request #1296 in SHRINE/shrine from feature/SHRINE2020-961 to develop * commit '809a1afedb8b48ba9656e83d8...
dwalenddwalend
809a1afedb8Better comment for SHRINE2020-961
dwalenddwalend
b3a4e62327bTesting of SHRINE2020-1180 and SHRINE2020-1091 - caveat some new bug tickets
dwalenddwalend
3bdf1f03dfdTwo more hacks to get SHRINE2020-1180 into review
dwalenddwalend
2e8597dcb44Changed to Seqs of events and links for SHRINE2020-1180
David WalendDavid Walend
56e9ea175ceMerge pull request #1295 in SHRINE/shrine from bugfix/SHRINE2020-1172 to develop * commit 'cd5d8532a2a854974273f980a...
dwalenddwalend
2f6ffa81ba3Merge remote-tracking branch 'origin/develop' into feature/SHRINE2020-1180
David WalendDavid Walend
9f5f0f1a63fMerge pull request #1293 in SHRINE/shrine from feature/SHRINE2020-1127 to develop * commit 'c52abf61671eca128ef3272b...
dwalenddwalend
c52abf61671Marc-Danie review comments for SHRINE2020-1127
dwalenddwalend
0bdef3a782bPlanning SHRINE2020-1180
dwalenddwalend
9f1306f0e42Merge branch 'bugfix/SHRINE2020-1172' into feature/SHRINE2020-1180
dwalenddwalend
423b520c2c5Merge branch 'feature/SHRINE2020-961' into feature/SHRINE2020-1180
Marc-Danie NazaireMarc-Danie Nazaire
6ce20e317adSHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086- Modified to re...
dwalenddwalend
cd5d8532a2amerging
Marc-Danie NazaireMarc-Danie Nazaire
42b106cd3c2SHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086-Augment existin...
Marc-Danie NazaireMarc-Danie Nazaire
d10f6a7189bSHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086-Augment existin...
Marc-Danie NazaireMarc-Danie Nazaire
40478891480SHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086-Augment existin...
Marc-Danie NazaireMarc-Danie Nazaire
7fe1d1aeff6Merge branch 'develop' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRINE2020-1085
Marc-Danie NazaireMarc-Danie Nazaire
73a1fe0224cSHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086-Augment existin...
dwalenddwalend
bd2a62c6be2merging
dwalenddwalend
368ac27b96dRemoved the bouncy castle library for SHRINE2020-961
dwalenddwalend
cd880ecdcd7merging
David WalendDavid Walend
2f653547531Merge pull request #1294 in SHRINE/shrine from feature/SHRINE2020-1094 to develop * commit '2cca91369dcc2e117f2b33d3...
Marc-Danie NazaireMarc-Danie Nazaire
efdc351feedSHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086-Augment existin...
dwalenddwalend
2cca91369dcMarc-Danie's review comments for SHRINE2020-1094
dwalenddwalend
06b5b75a2e1Removed all the keystores for SHRINE2020-961
dwalenddwalend
e87213b9dd4Removing keystore references from .conf files for SHRINE2020-961
dwalenddwalend
9b9ce29fe4dDeleted all the signature support code for SHRINE2020-961
dwalenddwalend
02c965bf74cDeleted CertData for SHRINE2020-961
dwalenddwalend
245fde10baaDeleted CertId for SHRINE2020-961
dwalenddwalend
dfbb05b1ef9Started deleting signature bits for SHRINE2020-961
dwalenddwalend
1fcc21c46f1Plans for deleting even more for SHRINE2020-961
dwalenddwalend
81bdcbd6ac0Queries without signatures for SHRINE2020-961
dwalenddwalend
59595134fb9Fixed another test on the build server for SHRINE2020-1172
dwalenddwalend
12f77d0f47dFixed a test on the build server for SHRINE2020-1172
dwalenddwalend
b62d54c7902Removing this unused bit of shrine.conf from commons/protocol fixes the QEP CSV test for SHRINE2020-1172
dwalenddwalend
0d89218914cGot junit 5 tests running and fixed through commons/protocol for SHRINE2020-1172
dwalenddwalend
c6113ec21d2Merge branch 'feature/SHRINE2020-1127' into bugfix/SHRINE2020-1172
dwalenddwalend
40b93667dfcTodo sweep for SHRINE2020-1094
dwalenddwalend
47fa3f5b0feTodo sweep for SHRINE2020-1094
dwalenddwalend
ee4ebe07834Three-event unit test v2 -> i2b2 for SHRINE2020-1094
dwalenddwalend
4c949bdfc23Added markers for broken junit tests to fix in SHRINE2020-1172
dwalenddwalend
aa97bf81d5dMade the SHRINE2020-1094 code and unit test changes to support lists of constraint relationships in xml
dwalenddwalend
3ee11cae987Planning to add support for longer timelines for SHRINE2020-1094
dwalenddwalend
04fd9b342e3Stray println for SHRINE2020-1127
dwalenddwalend
1fcc3fbafdaGot the remove access policy working on AWS SQS for SHRINE2020-1127
dwalenddwalend
18471d2ed06todo sweep for SHRINE2020-1127
dwalenddwalend
804502e789cCommand line tweaks for SHRINE2020-1127
dwalenddwalend
077d8dc3e47Fixed createNode for SHRINE2020-1127
David WalendDavid Walend
7bca2a45595Merge pull request #1288 in SHRINE/shrine from feature/SHRINE2020-1115 to develop * commit '925e96961a7531b76aaeb0fe...
dwalenddwalend
e105fb88773Tests for node lifecycle for SHRINE2020-1127
Marc-Danie NazaireMarc-Danie Nazaire
f9f3e53ed63SHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086-Augment existin...
Marc-Danie NazaireMarc-Danie Nazaire
22bede56035SHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086-Augment existin...
Marc-Danie NazaireMarc-Danie Nazaire
8827e1c0c87SHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086-Augment existin...
Marc-Danie NazaireMarc-Danie Nazaire
5e3ca175626SHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086-Augment existin...
Marc-Danie NazaireMarc-Danie Nazaire
331c5161dcaSHRINE2020-1085-Augment existing "when" panel with an additional INACTIVE Event 3 and SHRINE2020-1086-Augment existin...
David WalendDavid Walend
b7f7c20dcdfMerge pull request #1287 in SHRINE/shrine from feature/SHRINE2020-519-networkID to develop * commit 'dc36936041fac2c...
dwalenddwalend
467dc3313d7Lots of show command tests for SHRINE2020-1127
dwalenddwalend
522b7c5299cTest of modify network for SHRINE2020-1127
dwalenddwalend
6456ea7a097Check created nodes for SHRINE2020-1127
dwalenddwalend
9b6c400700dBuilding up more unit tests for SHRINE2020-1127
dwalenddwalend
6569fc846f1Test of create network for SHRINE2020-1127
Marc-Danie NazaireMarc-Danie Nazaire
95f5c2ce91bMerge pull request #1291 in SHRINE/shrine from feature/SHRINE2020-1119 to develop * commit '75d0323bc77c66d3625f6aec...
dwalenddwalend
bdf2e8b08acGot tests working for SHRINE2020-1127
dwalenddwalend
dc36936041fMarc-Danie's review comments for SHRINE2020-519
dwalenddwalend
3ad82e40daeFigured out how to get quoted arguments for SHRINE2020-1127
dwalenddwalend
24bccb5fbb8Got unit tests running inside intellij, plus a lot of todos from the first round of testing for SHRINE2020-1127
Marc-Danie NazaireMarc-Danie Nazaire
75d0323bc77SHRINE2020-1119-Update Kafka version to latest 3.2.0
dwalenddwalend
9bb22374fc0A little pom.xml cleanup for SHRINE2020-1127
dwalenddwalend
5eb8d8480ebFixes for tests in SHRINE2020-1127
dwalenddwalend
f530dac9251Set up the remove principal call for SHRINE2020-1127
Marc-Danie NazaireMarc-Danie Nazaire
9df4bc15aa0Fixed gitignore for the docker env file
Marc-Danie NazaireMarc-Danie Nazaire
7f51eaa8e2eMerge pull request #1290 in SHRINE/shrine from bugfix/SHRINE2020-1164 to develop * commit '725a29a09d8a62e075d0e3a5c...
dwalenddwalend
fa8be1c0cd4Filled in a lot of Andrew Dion's command line requests for SHRINE2020-1127
Marc-Danie NazaireMarc-Danie Nazaire
db73ff8ff49Merge pull request #1289 in SHRINE/shrine from bugfix/SHRINE2020-1170 to develop * commit 'e11b0289a256d33d2e0bd0d54...
Marc-Danie NazaireMarc-Danie Nazaire
725a29a09d8SHRINE2020-1164 - DSA heatmap tree does not expand to show terms
Marc-Danie NazaireMarc-Danie Nazaire
e11b0289a25SHRINE2020-1170 - Add momId to docker shrine hub config
David WalendDavid Walend
89a4b336542Merge pull request #1286 in SHRINE/shrine from feature/SHRINE2020-1097 to develop * commit '4bd6f92c39602ad6a761c725...
dwalenddwalend
925e96961a7Fixed the test for SHRINE2020-1115
dwalenddwalend
fc7de2f492bLets see if that test is important for SHRINE2020-1115
dwalenddwalend
5c6e4e3d9acCommitting before peaking at what's in develop - for SHRINE2020-1115
dwalenddwalend
d7f6062a334Merge remote-tracking branch 'origin/develop' into feature/SHRINE2020-519-networkID
dwalenddwalend
4bd6f92c396Merge remote-tracking branch 'origin/develop' into feature/SHRINE2020-1097
David WalendDavid Walend
30ec3b5cc89Merge pull request #1285 in SHRINE/shrine from feature/SHRINE2020-1100 to develop * commit '0c724cd454f0e28d9585e87b...
dwalenddwalend
0c724cd454fMarc-Danie suggested a better column name for SHRINE2020-1100
dwalenddwalend
c1440c3323cFirst guess for a bugfix for SHRINE2020-519
dwalenddwalend
de3ddcd47b0A lot of renaming and some more cleanup for SHRINE2020-519
dwalenddwalend
84ab73ebea1Found a big tract of dead xml-centric code to delete for SHRINE2020-519
dwalenddwalend
3edd7e987c6Renamed a lot of server-sided stuff in the QEP for SHRINE2020-519
dwalenddwalend
c086155ce5bBasicQuery translation tests in the QEP for SHRINE2020-1097
dwalenddwalend
9b16289839aUpdated some BasicQuery tests in the QEP to use v2 instead of i2b2 xml for SHRINE2020-1097
dwalenddwalend
ac8e6c334feAdded v2 to i2b2 xml tests for SHRINE2020-1097
dwalenddwalend
33e638bcc19First v2 to i2b2 xml test for SHRINE2020-1097
dwalenddwalend
fd877584f8fMerge remote-tracking branch 'origin/develop' into feature/SHRINE2020-1097
David WalendDavid Walend
7838cd7d93eMerge pull request #1273 in SHRINE/shrine from feature/SHRINE2020-1095 to develop * commit 'd3415940bf8537808659318e...
dwalenddwalend
4213b5eaddfAdded test of RunQueryForResult for SHRINE2020-1097
dwalenddwalend
bd43fe07fbcAdded test for RunQueryAtHub for SHRINE2020-1097
dwalenddwalend
2ee2520755dTurned on some tests for SHRINE2020-1097
dwalenddwalend
d1046746ebbAdded round-trip structure tests for query definitions for SHRINE2020-1097
dwalenddwalend
d3415940bf8Merge remote-tracking branch 'origin/develop' into feature/SHRINE2020-1095
David WalendDavid Walend
85a4d0fce8eMerge pull request #1282 in SHRINE/shrine from feature/SHRINE2020-1098-post-rearrange to develop * commit 'd8eeadc63...
dwalenddwalend
d30370366c2Turned back on some tests of query for SHRINE2020-1097
dwalenddwalend
e1772b8c5a9merging
dwalenddwalend
2b2f9744ec0Merge remote-tracking branch 'origin/develop' into feature/SHRINE2020-1100
dwalenddwalend
467c7a80638Can't drain the stream before reading the query from it. SHRINE2020-1100
dwalenddwalend
42748a94b05My own review and todo sweep for SHRINE2020-1100
dwalenddwalend
c2f54369401Stray println gone for SHRINE2020-1100
dwalenddwalend
bfa40856f27I think that's all tests restored for SHRINE2020-1100
David WalendDavid Walend
104853eaea6Merge pull request #1281 in SHRINE/shrine from feature/SHRINE2020-1098 to develop * commit 'ee64789f5b9c8200b6494431...
David WalendDavid Walend
d86542bd727Merge pull request #1280 in SHRINE/shrine from feature/SHRINE2020-1099 to develop * commit '91f364c535c55a354de2fd4a...
Marc-Danie NazaireMarc-Danie Nazaire
b440c2dc3d8Merge pull request #1284 in SHRINE/shrine from feature/SHRINE2020-1118 to develop * commit 'f014644641386ad9e0ef5f8d...
Marc-Danie NazaireMarc-Danie Nazaire
4a0d034d449Merge pull request #1283 in SHRINE/shrine from bugfix/SHRINE2020-1105 to develop * commit '65b0bc69c7006035960a5ac4b...
dwalenddwalend
a43ff065355Almost got it in two - SHRINE2020-1100
dwalenddwalend
3a1653aeff2Figuring out how these sql scripts get used for SHRINE2020-1100
Marc-Danie NazaireMarc-Danie Nazaire
f0146446413Merge branch 'bugfix/SHRINE2020-1105' of https://open.catalyst.harvard.edu/stash/scm/shrine/shrine into feature/SHRIN...
Marc-Danie NazaireMarc-Danie Nazaire
65b0bc69c70SHRINE2020-1105 - Fix Kafka version in docker - Added new kafka url in zookeeper image
dwalenddwalend
8c4253e97ceFirst try at full translation for SHRINE2020-1100
Marc-Danie NazaireMarc-Danie Nazaire
202c004b230SHRINE2020-1118 - Adjust user setup configuration for Kafka - remove unused file
Marc-Danie NazaireMarc-Danie Nazaire
0cea39619c5SHRINE2020-1118 - Adjust user setup configuration for Kafka - code cleanup
Marc-Danie NazaireMarc-Danie Nazaire
991e6753033SHRINE2020-1118 - Adjust user setup configuration for Kafka
Marc-Danie NazaireMarc-Danie Nazaire
4c848d22fe7SHRINE2020-1105 - Fix Kafka version in docker
dwalenddwalend
d8eeadc63ecMerge branch 'feature/SHRINE2020-1098' into feature/SHRINE2020-1098-post-rearrange
dwalenddwalend
ee64789f5b9Merging
dwalenddwalend
91f364c535cmerging
David WalendDavid Walend
65e7af35772Merge pull request #1279 in SHRINE/shrine from feature/SHRINE2020-1073-design-v2-query-structure to develop * commit...
dwalenddwalend
987bff35fe3occursAtLeast is not an option for SHRINE2020-1098
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