CONTENTS
2 minute video walkthrough
See before and after examples of de-identified notes
Scrubber 2.8 was used to scrub the examples below.
Scrubber 3.0 has significantly better performance (Accepted: BMC Medical Decision Making).
1. XML formatted input
- Before: testcase.xml
- After: scrubbed_testcase.xml
2. Unstructured text input
- Before: testcase.txt
- After: scrubbed_testcase.txt
Before and after examples of cTAKES annotations
Automated concept retrieval : Medical vocabularies and data dictionary
Scrubber 3.X is being donated and ported to the Apache cTAKES project.
We are concentrating our efforts on this transition.