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shrine { shrineHubBaseUrl = "https://localhost:6443" //The shrine hub's URL as observed from this tomcat server i2b2BaseUrl = "http://i2b2.example.com:9090" //The local i2b2's URL as observed from this tomcat server i2b2Domain = "exampleDomain" i2b2ShrineProjectName = "SHRINE" nodeKey = "somethingHub" //node key to get information from the hub about itself as a node. //shrineDatabaseType = "mysql" // "mysql" by default. It can be "sqlserver" "mysql" or "oracle" webclient { domain = ${i2b2Domain} name = ${i2b2ShrineProjectName} siteAdminEmail = "shrine-admin@example.com" } hiveCredentials { domain = ${i2b2Domain} username = "demo" crcProjectId = "Demo" ontProjectId = ${i2b2ShrineProjectName} }//hiveCredentials hub { create = true client { serverUrl = ${shrineHubBaseUrl} } //This part of the configuration is only used if no network is found in the hub's database //If no network is foundIt is loaded into the database when the hub starts. //To update the network or nodes, use the appropriate curl commands, not this config section. //Specified nodes are added only if the node key does not already exist in the hub's database. //todo put a reference to those commadscommands as part of SHRINE-3032 ifNoNetwork { network { name = "Shrine Dev Test Network" //Name of your network hubQueueName = "hub" //queue used to send messages to the hub, different from the queue used to send messages to a QEP and an adapter colocated with the hub adminEmail = "yourname@example.com" } //Nodes in this network //In ifNoNetwork - nodes are added only if the node key does not already exist in the hub's database. nodes = [ { name = "Shrine Dev1", //human-readable name for this node key = "somethingHub", //machine-friendly key used to identify this node. Never change this. userDomainName = "shrine-dev1.catalyst", //domain name for users from this node. adminEmail = "yourname@example.shrine-dev1.com", //the email address for the admin of this node queueName = "shrineDev1", //queue used to send messages to the qep and adapter at this node. This field is optional, defautls to the key if not specified sendQueries = "false" //true to send queries to an adapter at this node. An optional field, true by default. }, { name = "shrine-dev2", key = "shrineDev2", userDomainName = "shrine-dev2.catalyst", adminEmail = "yourname@example.shrine-dev2.com" } ] }//ifNoNetwork networkHealth { email { networkName = "Enter network name" networkSignature = "Enter network signature" grantDescription = "Enter description of grant" helpContactName = "Enter help contact name" helpContactEmail = "yourname@example.com" //The email address for the node admin to contact for help if there are questions about an error that occurred after running the connectivity test } webpage { networkName = "Enter network name" webPageNote = "This is a note" //Optional alert message to display at the bottom of the network health webpage alertMessage = "This is an alert message" //Optional alert message to display at the top of the network health webpage } connectivityTest { queryId = "123456789" //The query Id of a previously run query that will be used to create a new query for the connectivity test interval = "24 hours" //How often to run the connectivity test timeLimit = "10 minutes" //How long to wait for the query to finish running. If the query does not finish by this time, it will be marked as an error. delay = "5 seconds" //The initial delay for starting the connectivity test. If the delay is "5 seconds" then the connectivity test will run 5 seconds after server startup. } }//networkHealth messagequeue { blockingqWebApi { enabled = true //run shrine's MoM system at the hub. } }//messagequeue }//hub adapter { create = false }//adapter keystore { file = "/opt/shrine/shrine.keystore" privateKeyAlias = "shrine-hub" keyStoreType = "JKS" caCertAliases = ["shrine-ca"] }//keystore steward { emailDataSteward { //provide the email address of the shrine node system admin, to handle bounces and invalid addresses from = "shrine-admin@example.com" //provide the email address of the shrine node system admin, to handle bounces and invalid addresses to = "shrine-steward@example.com" //provide the externally-reachable URL for the data steward externalStewardBaseUrl = ${shrine.shrineHubBaseUrl}/shrine-api/shrine-steward } }//steward }//shrine |
It is rare but possible to have a set of patient data at the hub. Simply include the adapter section of shrine.conf from Chapter 8 in your shrine.conf .
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