shrine {
      
    trustModelIsHub = truepmEndpoint {
    attachSigningCerturl = true"http://i2b2_node_url:9090/i2b2/services/PMService/getServices"
  }
  authenticationType = "pm"ontEndpoint {
    authorizationTypeurl = "shrine-steward"
http://i2b2_node_url:9090/i2b2/services/OntologyService"
  }
  
  shrineStewardhiveCredentials {
      qepUserNamedomain = "qepi2b2demo"
      qepPasswordusername = "trustmedemo"
      stewardBaseUrlpassword = "https://localhost:6443demouser"
    }

crcProjectId = "Demo"
    includeAggregateResultsontProjectId = false"SHRINE"
      }

  messagequeue    maxQueryWaitTime {
        minutes = 5
      }

    broadcasterServiceEndpoint blockingq {
        urlserverUrl = "https://shrine-act-test.hms.harvard.edu:6443/shrine/rest/broadcaster/broadcast-metadata/mom"
    }
  }
 //end queryEntryPoint

  adapterbreakdownResultOutputTypes {
    create = truePATIENT_AGE_COUNT_XML {
    audit {
 description = "Age patient breakdown"
  collectAdapterAudit = false}
      databasePATIENT_RACE_COUNT_XML {
        dataSourceFromdescription = "JNDIRace patient breakdown"
    }
    jndiDataSourceName = "java:comp/env/jdbc/adapterAuditDB"PATIENT_VITALSTATUS_COUNT_XML {
        slickProfileClassNamedescription = "slick.jdbc.MySQLProfile$" 
  Vital Status patient breakdown"
    }
    }

    crcEndpointPATIENT_GENDER_COUNT_XML {
      urldescription = "http://i2b2_node_url:9090/i2b2/services/QueryToolServiceGender patient breakdown"
    }

  }

  adapterLockoutAttemptsThresholdqueryEntryPoint = 0{
    setSizeObfuscationcreate = true
    adapterMappingsFileName = "AdapterMappings.csv"

audit {
      collectQepAudit maxSignatureAge= {false
      minutesdatabase = 5{
    }

    immediatelyRunIncomingQueriesdataSourceFrom = true
"JNDI"
  } // end adapter

    networkStatusQueryjndiDataSourceName = "\\\\SHRINE\\SHRINE\\Demographics\\Gender\\Male\\"
java:comp/env/jdbc/qepAuditDB"
       humanReadableNodeName slickProfileClassName = "Harvard Test Nodeslick.jdbc.MySQLProfile$"
     shrineDatabaseType = "mysql"

    keystore {
      file = "/opt/shrine/shrine.keystore"             //slick.jdbc.H2Profile$
      password = "password"
      privateKeyAlias = "privateKeyAlias"
      keyStoreType = "JKS"
      caCertAliases = ["shrine-hub-ca"]
 //slick.jdbc.PostgresProfile$
     }

     problem {
      problemHandler = "net.shrine.problem.LogAndDatabaseProblemHandler$"
      database {
    	dataSourceFrom = "JNDI" //slick.jdbc.SQLServerProfile$
    	jndiDataSourceName = "java:comp/env/jdbc/problemDB"
      	slickProfileClassName = "slick.jdbc.MySQLProfile$"
      }
    }

  dashboard {
    happyBaseUrl = "https://localhost:6443/shrine/rest/happy"//slick.jdbc.JdbcProfile$
    statusBaseUrl = "https://localhost:6443/shrine/rest/internalstatus"

    database {
      dataSourceFrom = "JNDI"
      jndiDataSourceName = "java:comp/env/jdbc/problemDB"
      slickProfileClassName = "//slick.jdbc.MySQLProfile$"OracleProfile$
      }
  } //end dashboard}

     status {
      permittedHostOfOrigintrustModelIsHub = "localhost"true
    }

attachSigningCert =   squerylDataSource {true
    authenticationType  database {= "pm"
        dataSourceFromauthorizationType = "JNDIshrine-steward"
 
     queuedQueryPollUrl   jndiDataSourceName = "java:comp/env/jdbc/shrineDB"
      }https://your_shrine_url:6443/shrine/rest/i2b2/request" //Change to your url and port number

    }

    authenticate shrineSteward {
      qepUserName usersource= {"qep"
        domainqepPassword = "i2b2demotrustme"
       }stewardBaseUrl = "https://localhost:6443"
    }

  steward {
    createTopicsModeincludeAggregateResults = Approvedfalse

     emailDataSteward {
      sendAuditEmailsmaxQueryWaitTime ={
 false  //false to turn off the wholeminutes works= of5
 emailing the data steward  }

    //interval = "1 day" //Audit researchers daily
broadcasterServiceEndpoint {
        url = //timeAfterMidnight = "6 hours" //Audit researchers at 6 am. If the interval is less than 1 day then this delay is ignored."https://shrine-act-test.hms.harvard.edu:6443/shrine/rest/broadcaster/broadcast"
    }
  } //end queryEntryPoint

  adapter {
    create = true
    audit {
      //maxQueryCountBetweenAuditscollectAdapterAudit = 30false
 //If a researcher runs more thandatabase this{
 many queries since the last audit audit her dataSourceFrom = "JNDI"
      //minTimeBetweenAudits  jndiDataSourceName = "30 days" //If a researcher runs at least one query, audit those queries if this much time has passed
 
java:comp/env/jdbc/adapterAuditDB"
        slickProfileClassName = "slick.jdbc.MySQLProfile$" 
            //You must provide the email address of the shrine node system admin, to handle bounces and invalid addresses
   //slick.jdbc.H2Profile$
   //from = "shrine-admin@example.com"
      //You must provide the email address of the data steward
      //to = "shrine-steward@example.com"
 
      //subject = "Audit SHRINE researchers"
slick.jdbc.PostgresProfile$
         //The baseUrl for the data steward to be substituted in to email text. Must be supplied if it is used in the email text//slick.jdbc.SQLServerProfile$
       //stewardBaseUrl = "https://example.com:6443/steward/"
      //externalStewardBaseUrl   = "https://example.com:6443/steward/"
 
      //Text to use for the email audit//slick.jdbc.JdbcProfile$
      //AUDIT_LINES will be replaced by a researcherLine for each researcher to audit.
      //STEWARD_BASE_URL will be replaced by the value in stewardBaseUrl if available//slick.jdbc.OracleProfile$
      //emailBody}
 = """Please audit the}

 following users at STEWARD_BASE_URL at your earliest convinience: AUDIT_LINES"""
      //note that this can be a multiline message
 crcEndpoint {
      url = "http://i2b2_node_url:9090/i2b2/services/QueryToolService"
    }

    adapterLockoutAttemptsThreshold = 0
    setSizeObfuscation = //Texttrue
 to use per researcheradapterMappingsFileName to= audit"AdapterMappings.csv"

    maxSignatureAge {
 //FULLNAME, USERNAME, COUNT and LAST_AUDIT_DATE willminutes be= replaced5
  with appropriate text.}

    immediatelyRunIncomingQueries = //researcherLine = "FULLNAME (USERNAME) has run COUNT queries since LAST_AUDIT_DATE.true

  } // end adapter

    networkStatusQuery = "\\\\SHRINE\\SHRINE\\Demographics\\Gender\\Male\\"
    humanReadableNodeName = "Harvard Test Node"
    }shrineDatabaseType = "mysql"

    databasekeystore {
      dataSourceFromfile = "JNDI/opt/shrine/shrine.keystore"
      jndiDataSourceNamepassword = "java:comp/env/jdbc/stewardDBpassword"
      slickProfileClassNameprivateKeyAlias = "slick.jdbc.MySQLProfile$privateKeyAlias"
      keyStoreType = }
  } // end steward

  email"JKS"
      caCertAliases = ["shrine-hub-ca"]
    }

    problem {
  }
} // end shrine section

If you are using Oracle, please change the driverClassName to "oracle.jdbc.driver.OracleDriver".

<?xml version='1.0' encoding='utf-8'?>
<!-- The contents of this file will be loaded for each web application -->

<Context>
    <WatchedResource>WEB-INF/web.xml</WatchedResource>
    <Resource name="jdbc/problemDB" auth="Container" type="javax.sql.DataSource"
              maxTotal="128" maxIdle="32" maxWaitMillis="10000"
              username="shrine" password="demouser" driverClassName="com.mysql.jdbc.Driver"
              url="jdbc:mysql://localhost:3306/shrine_query_history"
              testOnBorrow="true" validationQuery="SELECT 1" />

    <Resource name="jdbc/shrineDB" auth="Container" type="javax.sql.DataSource"
              maxTotal="128" maxIdle="32" maxWaitMillis="10000"
              username="shrine" password="demouser" driverClassName="com.mysql.jdbc.Driver"
              url="jdbc:mysql://localhost:3306/shrine_query_history"
              testOnBorrow="true" validationQuery="SELECT 1" />

    <Resource name="jdbc/adapterAuditDB" auth="Container" type="javax.sql.DataSource"
              maxTotal="128" maxIdle="32" maxWaitMillis="10000"
              username="shrine" password="demouser" driverClassName="com.mysql.jdbc.Driver"
              url="jdbc:mysql://localhost:3306/adapterAuditDB"
              testOnBorrow="true" validationQuery="SELECT 1" />

    <Resource name="jdbc/qepAuditDB" auth="Container" type="javax.sql.DataSource"
              maxTotal="512" maxIdle="32" maxWaitMillis="10000"
              username="shrine" password="demouser" driverClassName="com.mysql.jdbc.Driver"
              url="jdbc:mysql://localhost:3306/qepAuditDB"
              testOnBorrow="true" validationQuery="SELECT 1" />

    <Resource name="jdbc/stewardDB" auth="Container" type="javax.sql.DataSource"
              maxTotal="128" maxIdle="32" maxWaitMillis="10000"
              username="shrine" password="demouser" driverClassName="com.mysql.jdbc.Driver"
              url="jdbc:mysql://localhost:3306/stewardDB"
              testOnBorrow="true" validationQuery="SELECT 1" />
</Context>

Please note that qepAuditDB is set to 512 connections, which will help in scaling issues for a larger network.

 files: [
     "dist/shrine.bundle.js"
//   "shrine.controller.js",
//   "i2b2_msgs.js",
//   "shrine.plugin.js"
  ],

{
  files: [
    "dist/shrine.bundle.js"
  ],

  css: [],
  config: {
    // additional configuration variables that are set by the system
    name: "SHRINE Cell",
    description: "The SHRINE cell...",
    category: ["core","cell","shrine"],
    newTopicURL: "https://your_shrine_url:6443/steward/client/index.html",
    readApprovedURL:"https://your_shrine_url:6443/shrine/rest/i2b2/request",
    wrapperHtmlFile: "./js-shrine/shrine.plugin.html"
  }
}