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SWIFT (Semantic Web Ingest from Tables) is a toolkit that allows experienced users to bulk-upload data into an eagle-i repository, via ETL (Extract, Transform and Load). The figure below is a high level depiction of the ETL process. Currently the The toolkit supports only Excel spreadsheets and csv files as input files(though both need to conform to a SWIFT template, see below).
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- an ETL Input Generator - command line program that generates Excel spreadsheet templates and mapping files for the various resource types of the eagle-i resource ontology (e.g. a template/map for antibodies, for instruments, etc.)
- an ETLer - command line program that executes a bulk upload
- a deETLer - command line program that deletes a previous ETL upload
- Bulk workflow - command line program that executes workflow transitions on groups of resources, e.g. Publish, Return to curation, Withdraw
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