OVERVIEW
This database was created to store hundreds of thousands of human and machine annotations.
In this context "human" annotations refer to annotations created by an expert reviewer using a program such as protege, whereas "machine" annotations are automatically labeled. Medical dictionaries and journal publications are parsed and stored in this database.
LIST OF TABLES
Table Name | Used for Scrubbing | Used for Publication Analysis |
|---|---|---|
Feature_matrix_test | YES |
|
Feature_matrix_train | YES |
|
Human_annotations_test | YES |
|
Human_annotations_train | YES |
|
Machine_annotations_test | YES |
|
Machine_annotations_train | YES |
|
Lookup_dictionary | YES |
|
Lookup_term_frequency | YES |
|
Lookup_umls | YES |
|
Pubs_authors |
| YES |
Pubs_keywords |
| YES |
Pubs |
| YES |
Pubs_refs |
| YES |
TABLE DESCRIPTIONS
Feature_matrix_*
Stores feature matrix that is built from the Machine_annotations_* and Human_annotations_* tables. This is the rolled up feature set used for classification.
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