Xavier Haurie | 4f235120e3d | stop calling mockito in verbose mode | | |
Xavier Haurie | 9a6f0b63be8 | remove un-needed step in converting incoming JSON string to a DTO | | |
Xavier Haurie | 5d32951bca9 | remove un-needed step in converting incoming JSON string to a DTO | | |
Xavier Haurie | 4f020ae346f | Merge branch 'epic-integration-data-cleanup' into develop
* epic-integration-data-cleanup:
minor change to be able... | | |
Xavier Haurie | 14301ea276f | Merge branch 'epic-integration-data-cleanup' into develop
* epic-integration-data-cleanup:
minor change to be able... | | |
Xavier Haurie | 98df2a3f6e3 | minor change to be able to perform a new commit -- because git seems to be in a confused state when trying to merge i... | | |
Xavier Haurie | 673bb2ef016 | minor change to be able to perform a new commit -- because git seems to be in a confused state when trying to merge i... | | |
Xavier Haurie | 6275805548b | super minor clean up of license comment block | | |
Xavier Haurie | 28a77e91075 | super minor clean up of license comment block | | |
marc-danie | 1e70ce188bb | modified to return address object | | |
marc-danie | 4033c6e397a | modified to return address object | | |
marc-danie | 5eac50d43c9 | improved readability of expand and collapse of subject details and removed mrnInfoList autocomplete | | |
marc-danie | 3ebc4f4fbb7 | improved readability of expand and collapse of subject details and removed mrnInfoList autocomplete | | |
Xavier Haurie | 7373e76f9ee | added 2 resource-layer tests | | |
Xavier Haurie | 59eacd5f983 | added 2 resource-layer tests | | |
Xavier Haurie | 1705f8c962c | very minor clean up | | |
Xavier Haurie | bb85cfeeeee | very minor clean up | | |
Xavier Haurie | ac3f6d9dbca | very minor clean up | | |
Xavier Haurie | 1e8ccca4443 | very minor clean up | | |
Xavier Haurie | 3c664ad5988 | removed gson from TestUtils (use the one in StudyResource so we know that (de)serialization always yields the same re... | | |
Xavier Haurie | a7e0ff08c08 | removed gson from TestUtils (use the one in StudyResource so we know that (de)serialization always yields the same re... | | |
Xavier Haurie | dcabf195e23 | added 3 tests:
testGetStudyMembersList
testAddSubjectToStudy
testAddStudyMember | | |
Xavier Haurie | b5f8c23ff30 | added 3 tests:
testGetStudyMembersList
testAddSubjectToStudy
testAddStudyMember | | |
Xavier Haurie | a044f7ed6a8 | added comment | | |
Xavier Haurie | d547e5b8c4b | added comment | | |
Xavier Haurie | 009f338efc4 | added one more test. slightly more involved mocking. | | |
Xavier Haurie | 3f474a67a29 | added one more test. slightly more involved mocking. | | |
marc-danie | b0478cf2300 | added country, race, and ethnicity to the subject detail section and fix collapse/expand all | | |
marc-danie | 3246d8f1b06 | added country, race, and ethnicity to the subject detail section and fix collapse/expand all | | |
marc-danie | af959d09196 | updated to reflect changes in Row class | | |
marc-danie | f0f8a80027b | updated to reflect changes in Row class | | |
marc-danie | a846a10c89b | remove getStateAbbreviation method | | |
marc-danie | c3ea4b8f2b0 | remove getStateAbbreviation method | | |
marc-danie | fc7fc338ec8 | added secondary contact, race, and ethnicity | | |
marc-danie | c08e63cc2ac | added secondary contact, race, and ethnicity | | |
marc-danie | aad88f6c988 | modified to include gender, address, secondary contact, race, and ethnicity | | |
marc-danie | 52adb9bd4c4 | modified to include gender, address, secondary contact, race, and ethnicity | | |
marc-danie | a7dae6ab3e2 | modified to include ethnic1 column data | | |
marc-danie | 93c6aa2ce04 | modified to include ethnic1 column data | | |
Xavier Haurie | 6b4fbef5b13 | minor clean up | | |
Xavier Haurie | 560b3c0243e | minor clean up | | |
Xavier Haurie | d20ad810b39 | added a JSON-level test for StudyResource.getVisitApprovals() | | |
Xavier Haurie | f7e7892919a | added a JSON-level test for StudyResource.getVisitApprovals() | | |
Xavier Haurie | 2bdae963e08 | added a JSON-level test for studyResource.getTemplatesToApprove() | | |
Xavier Haurie | 2294e63452e | added a JSON-level test for studyResource.getTemplatesToApprove() | | |
marc-danie | 76d5134d027 | added table with the primary contact, race, etc to the subject details section and fixed cleanup issue when listing s... | | |
marc-danie | 0e9c5d904bd | added table with the primary contact, race, etc to the subject details section and fixed cleanup issue when listing s... | | |
marc-danie | 920c56f24fb | added use of MrnInfo class for EMPI data | | |
marc-danie | 90b4739a2ef | added use of MrnInfo class for EMPI data | | |
marc-danie | 53f9c697b7f | includes autocomplete and expand and collapse of subjects | | |
marc-danie | ed0914e2abc | includes autocomplete and expand and collapse of subjects | | |
Xavier Haurie | cce16419fb9 | created a test utility method for comparing any two objects (String, JsonElement or POJO) interpreted as Json.
applie... | | |
Xavier Haurie | 26c744b8ca1 | created a test utility method for comparing any two objects (String, JsonElement or POJO) interpreted as Json.
applie... | | |
Xavier Haurie | 28de2945487 | After much research and effort, found a way to mock the session and the user so that we can run resource tests which ... | | |
Xavier Haurie | 1196cae4235 | After much research and effort, found a way to mock the session and the user so that we can run resource tests which ... | | |
Xavier Haurie | 7f4f56d4011 | tweak test method name | | |
Xavier Haurie | dc4a448c965 | tweak test method name | | |
Xavier Haurie | a12f317a2da | Merge branch 'epic-integration-data-cleanup' into develop
* epic-integration-data-cleanup: (35 commits)
code clean... | | |
Xavier Haurie | abdfcc4a447 | Merge branch 'epic-integration-data-cleanup' into develop
* epic-integration-data-cleanup: (35 commits)
code clean... | | |
marc-danie | f621edd780f | adding | | |
marc-danie | 483e60271d3 | adding | | |
marc-danie | 5a26f509211 | adding | | |
marc-danie | f34a4270488 | adding | | |
Xavier Haurie | 8166c6dc9f0 | code clean-up / refactoring | | |
Xavier Haurie | af2403b8ddd | code clean-up / refactoring | | |
Xavier Haurie | 2caa520d8ee | use left joins instead of inner joins for gender, country, etc. because the columns in the database allow null;
fix m... | | |
Xavier Haurie | cf0aff615f2 | use left joins instead of inner joins for gender, country, etc. because the columns in the database allow null;
fix m... | | |
Xavier Haurie | c6d04db3751 | bugs: setting last name in output to first name of input data | | |
Xavier Haurie | 21191d9e92e | bugs: setting last name in output to first name of input data | | |
Xavier Haurie | 77b437b1804 | bugs: using country id instead of country name; setting last name in output to first name of input data | | |
Xavier Haurie | 20936c9f621 | bugs: using country id instead of country name; setting last name in output to first name of input data | | |
Xavier Haurie | cae2a17ff7e | clean up sample properties file | | |
Xavier Haurie | ecedca1e49c | clean up sample properties file | | |
Xavier Haurie | b52f97d9815 | work on usability aspects, error handling, logging, README file, etc. | | |
Xavier Haurie | ecfdf94d9d9 | work on usability aspects, error handling, logging, README file, etc. | | |
Xavier Haurie | 98529d86f3b | Added -help option
Made decrypt true by default
Added comments and program args to shell script | | |
Xavier Haurie | deca49b6b9e | Added -help option
Made decrypt true by default
Added comments and program args to shell script | | |
Xavier Haurie | 6e2e0c65a73 | fix subject comparator for sorting.
fix output for missing and invalid MRNs. | | |
Xavier Haurie | fda6c41b44a | fix subject comparator for sorting.
fix output for missing and invalid MRNs. | | |
Xavier Haurie | 837c64d1a91 | fix typo | | |
Xavier Haurie | 9adc1ff14cf | fix typo | | |
Xavier Haurie | 46d3f248fff | replaced left joins on gender with inner joins
added sorting to list of non-clustered subjects needing curation | | |
Xavier Haurie | 7eb599491ee | replaced left joins on gender with inner joins
added sorting to list of non-clustered subjects needing curation | | |
Xavier Haurie | 1fa6ff157e5 | refactored prepared statements so they don't get re-created whenever a new query is run. | | |
Xavier Haurie | 63ead83e744 | refactored prepared statements so they don't get re-created whenever a new query is run. | | |
Xavier Haurie | c6922f03d13 | debugged option to make test-mode run faster again | | |
Xavier Haurie | fa02aa8becc | debugged option to make test-mode run faster again | | |
Xavier Haurie | 223e0734d3b | add an option to make test-mode run faster again | | |
Xavier Haurie | 1d842563ae7 | add an option to make test-mode run faster again | | |
Xavier Haurie | 2eb99a1bd45 | debug and add missing (minor) features -- this version seems very slow! | | |
Xavier Haurie | e24e3bc432c | debug and add missing (minor) features -- this version seems very slow! | | |
marc-danie | 50f995d665e | fixed the active navigation menu item | | |
marc-danie | 625b8584392 | fixed the active navigation menu item | | |
Xavier Haurie | 15e830599d4 | debug and add missing (minor) features | | |
Xavier Haurie | 6685582f8b2 | debug and add missing (minor) features | | |
Xavier Haurie | 64235ac421a | implemented according to new specification. | | |
Xavier Haurie | 3126779142b | implemented according to new specification. | | |
Carl | 6dc5eba6587 | Rendering (arbitrarily chosen) different colors for appointment summaries with Subject NA. Color changes back and for... | | |
Carl | 3a4fcb7f0e4 | Rendering (arbitrarily chosen) different colors for appointment summaries with Subject NA. Color changes back and for... | | |
Xavier Haurie | bcf62631e35 | converting to new spec. Not tested yet. | | |
Xavier Haurie | 1f3eef4adc6 | converting to new spec. Not tested yet. | | |
Xavier Haurie | ee125e7319d | output 2 curation lists to 2 distinct CSV files. | | |
Xavier Haurie | d70f08c6c97 | output 2 curation lists to 2 distinct CSV files. | | |
Xavier Haurie | 0a7246f6e7f | Fine-tune program output -- what goes to stdout, stderr, and/or log4j. | | |
Xavier Haurie | c32b1972a48 | Fine-tune program output -- what goes to stdout, stderr, and/or log4j. | | |
Carl | b3c0d146e9a | Render switch-subjects appt-summaries on home and appts calendars | | |
Carl | a83e51d8c64 | Render switch-subjects appt-summaries on home and appts calendars | | |
Xavier Haurie | 91ae84323ac | odds and ends | | |
Xavier Haurie | dd08c79733e | odds and ends | | |
marc-danie | df6d28debf9 | added item to the navigation menu that links to the new Subject search form | | |
marc-danie | c85a4dd3ada | added item to the navigation menu that links to the new Subject search form | | |
marc-danie | 7b847695beb | updated subject search beta form | | |
marc-danie | d71cd5948dd | updated subject search beta form | | |
Xavier Haurie | 1004efd9cfc | vast improvements to CLI (more options, more error checking, more error feedback)
Plugged in POI but have't really st... | | |
Xavier Haurie | cd56bbf657a | vast improvements to CLI (more options, more error checking, more error feedback)
Plugged in POI but have't really st... | | |
Xavier Haurie | c92ff9b364a | removed apache commons cli from where it was not used
feedback from code review on SubjectDataCleaner. Simple changes... | | |
Xavier Haurie | 45a95283468 | removed apache commons cli from where it was not used
feedback from code review on SubjectDataCleaner. Simple changes... | | |
marc-danie | 8711fa4224d | adding | | |
marc-danie | 4982847dfd8 | adding | | |
Carl | f8a648169e3 | back-end for switch-subjects button / div.
add switch-subjects to home-screen. | | |
Carl | 420222d0009 | back-end for switch-subjects button / div.
add switch-subjects to home-screen. | | |
Xavier Haurie | 4c34be7d9e4 | fixed some documentation | | |
Xavier Haurie | abc75314317 | fixed some documentation | | |
Xavier Haurie | f203fb7f6e3 | debugged data cleaner. | | |
Xavier Haurie | 6e69840b455 | debugged data cleaner. | | |
Ankit Panchamia | 334739fe18e | Merge remote-tracking branch 'origin/blockVisit' into develop | | |
Ankit Panchamia | 208868da91d | Merge remote-tracking branch 'origin/blockVisit' into develop | | |
Xavier Haurie | b6dd6219205 | Lots of comments / documentation
First cut implementing the output to CSV of subjects with no matches but needing cu... | | |
Xavier Haurie | ad18c7f2c82 | Lots of comments / documentation
First cut implementing the output to CSV of subjects with no matches but needing cu... | | |
Xavier Haurie | 6507e7758bb | modified matching rules as per my interpretation of https://open.med.harvard.edu/wiki/display/HCCRCSCHED/2016-04-22+M... | | |
Xavier Haurie | 67887694693 | modified matching rules as per my interpretation of https://open.med.harvard.edu/wiki/display/HCCRCSCHED/2016-04-22+M... | | |
Xavier Haurie | 3006fbefcdb | copied mgh dump data from scheduler-internal to scheduler project | | |
Xavier Haurie | 1a7af1ef2c5 | copied mgh dump data from scheduler-internal to scheduler project | | |
Xavier Haurie | 737940c716a | fix fake subjects program to reset auto incremented subject id before inserting fake subjects | | |
Xavier Haurie | fcad52fd041 | fix fake subjects program to reset auto incremented subject id before inserting fake subjects | | |
Carl | bc9b4053e7c | another checkpoint on the way to 'change the subject' wizard/div
-- new subject id and visit id make it to the resour... | | |
Carl | c18d5ad2545 | another checkpoint on the way to 'change the subject' wizard/div
-- new subject id and visit id make it to the resour... | | |
Xavier Haurie | f123696ef62 | minor tweak on sample data | | |
Xavier Haurie | c584a74b116 | minor tweak on sample data | | |
Xavier Haurie | 796be26e2dd | work in progress : integrate lists of stale study assignments into curation custers | | |
Xavier Haurie | 93c3effe0dc | work in progress : integrate lists of stale study assignments into curation custers | | |
Xavier Haurie | 8fc98793a6b | work in progress : integrate lists of stale study assignments into curation custers | | |
Xavier Haurie | b75ea3661b0 | work in progress : integrate lists of stale study assignments into curation custers | | |
Xavier Haurie | 1d3a71ea152 | work in progress : integrate lists of stale subjects and assignment to studies into curation custers | | |
Xavier Haurie | 5ce2bb47131 | work in progress : integrate lists of stale subjects and assignment to studies into curation custers | | |
Carl | 30353c6e4b4 | checkpoint on the way to 'change the subject' wizard/div | | |
Carl | ef6a840cea3 | checkpoint on the way to 'change the subject' wizard/div | | |
Xavier Haurie | 97e96f53149 | added a little bit of profiling | | |
Xavier Haurie | 499abb60ec2 | added a little bit of profiling | | |
Xavier Haurie | 04ac79151fc | Input data was wrong, and clusters were missing the very first entry systematically. Program now outputs expected CSV... | | |
Xavier Haurie | 2c79b8a143e | Input data was wrong, and clusters were missing the very first entry systematically. Program now outputs expected CSV... | | |
Xavier Haurie | 42a35914253 | outputs CSV. Seems to output wrong data though. | | |
Xavier Haurie | bc8f79f9698 | outputs CSV. Seems to output wrong data though. | | |
Xavier Haurie | c61f6ad2cc4 | Merge branch 'epic-integration-data-cleanup' into develop
* epic-integration-data-cleanup:
minor progress on makin... | | |
Xavier Haurie | 7b002b16c8a | Merge branch 'epic-integration-data-cleanup' into develop
* epic-integration-data-cleanup:
minor progress on makin... | | |
Xavier Haurie | 292091fbe8d | data clean-up starting to work. Based on the sample data in sample-data-big-cluster.sql, it generates a cluster of 6 ... | | |
Xavier Haurie | ca82ef92e4d | data clean-up starting to work. Based on the sample data in sample-data-big-cluster.sql, it generates a cluster of 6 ... | | |
Xavier Haurie | c7138115582 | re-wrote if statement into ? : ternary statement | | |
Xavier Haurie | d96a6c7a909 | re-wrote if statement into ? : ternary statement | | |
Carl | e1cc5213a94 | Initial pass at block-visit | | |
Carl | 548911b2af1 | Initial pass at block-visit | | |
Xavier Haurie | cd20660179d | Merge branch 'develop' into epic-integration-data-cleanup
* develop:
ignore additional log files
added option to... | | |
Xavier Haurie | dd7786eaa2c | Merge branch 'develop' into epic-integration-data-cleanup
* develop:
ignore additional log files
added option to... | | |
Xavier Haurie | 4b05d1b910d | ignore additional log files | | |
Xavier Haurie | b14a0c77e92 | ignore additional log files | | |
Xavier Haurie | a9566fcd327 | added option to randomize MRNs; by default MRN's are not randomized.
Randomizing here means just inserting random sp... | | |
Xavier Haurie | e9af763a8bf | added option to randomize MRNs; by default MRN's are not randomized.
Randomizing here means just inserting random sp... | | |
Xavier Haurie | f9e149e1564 | Added a cheat-sheet to document how to use the Vagrant scheduler box, in detail. All the setup and basic lifecylce op... | | |
Xavier Haurie | 162a694cf7d | Added a cheat-sheet to document how to use the Vagrant scheduler box, in detail. All the setup and basic lifecylce op... | | |
Xavier Haurie | 5b98f065949 | Merge branch 'develop' into epic-integration-data-cleanup
* develop: (37 commits)
WIP!! I just don't like to have ... | | |
Xavier Haurie | cf2bb9202a7 | Merge branch 'develop' into epic-integration-data-cleanup
* develop: (37 commits)
WIP!! I just don't like to have ... | | |
Xavier Haurie | 4dbf753f7fe | Merge branch 'develop' of https://open.med.harvard.edu/stash/scm/hccrcscheduler/scheduler into develop
* 'develop' o... | | |
Xavier Haurie | 828d6890631 | Merge branch 'develop' of https://open.med.harvard.edu/stash/scm/hccrcscheduler/scheduler into develop
* 'develop' o... | | |
Xavier Haurie | 6de9d2c9dd7 | WIP!! I just don't like to have lots of code uncommitted before I go home. | | |
Xavier Haurie | 617e3ef14a0 | WIP!! I just don't like to have lots of code uncommitted before I go home. | | |
Ankit Panchamia | 4b751116034 | Add subject to study functionality and restriction on subject phone fields. | | |
Ankit Panchamia | 8217b8d9a29 | Add subject to study functionality and restriction on subject phone fields. | | |
Ankit Panchamia | 4bb544d0676 | refresh subject data on edit... | | |
Ankit Panchamia | 776a227e542 | refresh subject data on edit... | | |
Carl | 0b09cfb4a2a | Add some unit-tests for SubjectServiceClassic | | |
Carl | f0072f7a4ef | Add some unit-tests for SubjectServiceClassic | | |
Ankit Panchamia | 6b135854fdc | implemented subject edit functionality and cleaned up global/local variables | | |
Ankit Panchamia | be605852487 | implemented subject edit functionality and cleaned up global/local variables | | |
Carl | d65b1535641 | Add some unit-tests | | |
Carl | 93f41ab0a4d | Add some unit-tests | | |
Carl | 0cc708a7e92 | Add placement suggestion in example context.xml | | |
Carl | 126ae08d538 | Add placement suggestion in example context.xml | | |
Ankit Panchamia | 089fae28ac1 | remove unused method. | | |
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